Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.58■■□□□ 1.05
Scnn1aQ61180 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scnn1aQ61180 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Scnn1aQ61180 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scnn1aQ61180 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scnn1aQ61180 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.58■■□□□ 1.04
Scnn1aQ61180 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.57■■□□□ 1.04
Scnn1aQ61180 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scnn1aQ61180 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scnn1aQ61180 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.56■■□□□ 1.04
Scnn1aQ61180 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scnn1aQ61180 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scnn1aQ61180 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.56■■□□□ 1.04
Scnn1aQ61180 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scnn1aQ61180 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.56■■□□□ 1.04
Scnn1aQ61180 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.56■■□□□ 1.04
Scnn1aQ61180 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scnn1aQ61180 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Scnn1aQ61180 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scnn1aQ61180 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scnn1aQ61180 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Scnn1aQ61180 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scnn1aQ61180 Gm11249-201ENSMUST00000117071 859 ntBASIC21.55■■□□□ 1.04
Scnn1aQ61180 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
Scnn1aQ61180 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scnn1aQ61180 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scnn1aQ61180 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scnn1aQ61180 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scnn1aQ61180 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scnn1aQ61180 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scnn1aQ61180 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scnn1aQ61180 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.54■■□□□ 1.04
Scnn1aQ61180 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.54■■□□□ 1.04
Scnn1aQ61180 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scnn1aQ61180 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Gm2399-201ENSMUST00000104944 225 ntBASIC21.53■■□□□ 1.04
Scnn1aQ61180 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scnn1aQ61180 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scnn1aQ61180 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scnn1aQ61180 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Scnn1aQ61180 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Scnn1aQ61180 Gm5643-201ENSMUST00000117081 966 ntBASIC21.52■■□□□ 1.04
Scnn1aQ61180 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scnn1aQ61180 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scnn1aQ61180 Gm10812-201ENSMUST00000099864 546 ntBASIC21.52■■□□□ 1.04
Scnn1aQ61180 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scnn1aQ61180 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scnn1aQ61180 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Scnn1aQ61180 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scnn1aQ61180 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.5■■□□□ 1.03
Scnn1aQ61180 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.5■■□□□ 1.03
Scnn1aQ61180 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.5■■□□□ 1.03
Scnn1aQ61180 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
Scnn1aQ61180 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms