Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sim1Q61045 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sim1Q61045 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sim1Q61045 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim1Q61045 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim1Q61045 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim1Q61045 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sim1Q61045 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sim1Q61045 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Sim1Q61045 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sim1Q61045 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim1Q61045 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.5■□□□□ 0.55
Sim1Q61045 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sim1Q61045 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Sim1Q61045 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim1Q61045 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim1Q61045 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sim1Q61045 Iqck-206ENSMUST00000208658 2891 ntBASIC18.49■□□□□ 0.55
Sim1Q61045 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim1Q61045 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sim1Q61045 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim1Q61045 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim1Q61045 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.49■□□□□ 0.55
Sim1Q61045 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim1Q61045 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim1Q61045 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.49■□□□□ 0.55
Sim1Q61045 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim1Q61045 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.49■□□□□ 0.55
Sim1Q61045 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim1Q61045 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sim1Q61045 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sim1Q61045 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sim1Q61045 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Sim1Q61045 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sim1Q61045 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sim1Q61045 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sim1Q61045 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sim1Q61045 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sim1Q61045 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sim1Q61045 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sim1Q61045 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sim1Q61045 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sim1Q61045 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sim1Q61045 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sim1Q61045 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sim1Q61045 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sim1Q61045 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sim1Q61045 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sim1Q61045 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sim1Q61045 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sim1Q61045 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sim1Q61045 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sim1Q61045 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.47■□□□□ 0.55
Sim1Q61045 Gm7860-201ENSMUST00000121190 879 ntBASIC18.47■□□□□ 0.55
Sim1Q61045 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.47■□□□□ 0.55
Sim1Q61045 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sim1Q61045 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sim1Q61045 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sim1Q61045 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sim1Q61045 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Sim1Q61045 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sim1Q61045 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.46■□□□□ 0.55
Sim1Q61045 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sim1Q61045 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sim1Q61045 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.46■□□□□ 0.55
Sim1Q61045 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sim1Q61045 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sim1Q61045 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sim1Q61045 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Sim1Q61045 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.46■□□□□ 0.55
Sim1Q61045 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sim1Q61045 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sim1Q61045 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sim1Q61045 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sim1Q61045 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sim1Q61045 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sim1Q61045 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sim1Q61045 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sim1Q61045 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sim1Q61045 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sim1Q61045 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sim1Q61045 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.45■□□□□ 0.54
Sim1Q61045 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sim1Q61045 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sim1Q61045 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sim1Q61045 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sim1Q61045 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sim1Q61045 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sim1Q61045 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sim1Q61045 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sim1Q61045 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sim1Q61045 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sim1Q61045 Gm13534-201ENSMUST00000121169 513 ntBASIC18.43■□□□□ 0.54
Sim1Q61045 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sim1Q61045 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sim1Q61045 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.43■□□□□ 0.54
Sim1Q61045 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sim1Q61045 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sim1Q61045 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sim1Q61045 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms