Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.17■□□□□ 0.66
Slc6a4Q60857 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.17■□□□□ 0.66
Slc6a4Q60857 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a4Q60857 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Slc6a4Q60857 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.16■□□□□ 0.66
Slc6a4Q60857 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a4Q60857 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Slc6a4Q60857 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a4Q60857 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a4Q60857 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc6a4Q60857 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc6a4Q60857 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.15■□□□□ 0.66
Slc6a4Q60857 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc6a4Q60857 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Slc6a4Q60857 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a4Q60857 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Slc6a4Q60857 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a4Q60857 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a4Q60857 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a4Q60857 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a4Q60857 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Slc6a4Q60857 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a4Q60857 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.12■□□□□ 0.65
Slc6a4Q60857 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a4Q60857 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slc6a4Q60857 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a4Q60857 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Slc6a4Q60857 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Slc6a4Q60857 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a4Q60857 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.11■□□□□ 0.65
Slc6a4Q60857 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a4Q60857 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a4Q60857 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a4Q60857 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a4Q60857 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a4Q60857 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a4Q60857 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a4Q60857 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a4Q60857 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a4Q60857 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Slc6a4Q60857 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
Slc6a4Q60857 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a4Q60857 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.1■□□□□ 0.65
Slc6a4Q60857 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a4Q60857 Gm37856-201ENSMUST00000191634 999 ntBASIC19.1■□□□□ 0.65
Slc6a4Q60857 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a4Q60857 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Slc6a4Q60857 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a4Q60857 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a4Q60857 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms