Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-3Q5R1E6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-3Q5R1E6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-3Q5R1E6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-3Q5R1E6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-3Q5R1E6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav6-3Q5R1E6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-3Q5R1E6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Gm26833-201ENSMUST00000180899 440 ntBASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Gm27454-201ENSMUST00000185090 204 ntBASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-3Q5R1E6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.96□□□□□ -0.02
Trav6-3Q5R1E6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-3Q5R1E6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-3Q5R1E6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-3Q5R1E6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-3Q5R1E6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Grk6-206ENSMUST00000224995 2971 ntBASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-3Q5R1E6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms