Protein–RNA interactions for Protein: Q5BKP2

Usp13, Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13Q5BKP2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp13Q5BKP2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp13Q5BKP2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp13Q5BKP2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp13Q5BKP2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp13Q5BKP2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp13Q5BKP2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp13Q5BKP2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp13Q5BKP2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp13Q5BKP2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Usp13Q5BKP2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.02■□□□□ 0.96
Usp13Q5BKP2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp13Q5BKP2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.02■□□□□ 0.96
Usp13Q5BKP2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp13Q5BKP2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.02■□□□□ 0.95
Usp13Q5BKP2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp13Q5BKP2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp13Q5BKP2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Rarb-207ENSMUST00000225921 2756 ntBASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp13Q5BKP2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp13Q5BKP2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Usp13Q5BKP2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Usp13Q5BKP2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Usp13Q5BKP2 Grk6-206ENSMUST00000224995 2971 ntBASIC21■□□□□ 0.95
Usp13Q5BKP2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp13Q5BKP2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21■□□□□ 0.95
Usp13Q5BKP2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21■□□□□ 0.95
Usp13Q5BKP2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp13Q5BKP2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp13Q5BKP2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp13Q5BKP2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Reep4-203ENSMUST00000226563 1444 ntBASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp13Q5BKP2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp13Q5BKP2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Usp13Q5BKP2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp13Q5BKP2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp13Q5BKP2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms