Protein–RNA interactions for Protein: Q499D0

Foxn3, Forkhead box protein N3, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn3Q499D0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Foxn3Q499D0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxn3Q499D0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxn3Q499D0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.58■□□□□ 0.88
Foxn3Q499D0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxn3Q499D0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxn3Q499D0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Foxn3Q499D0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Foxn3Q499D0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxn3Q499D0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxn3Q499D0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Gm13534-201ENSMUST00000121169 513 ntBASIC20.57■□□□□ 0.88
Foxn3Q499D0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn3Q499D0 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.56■□□□□ 0.88
Foxn3Q499D0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn3Q499D0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn3Q499D0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn3Q499D0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Foxn3Q499D0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn3Q499D0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn3Q499D0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn3Q499D0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Foxn3Q499D0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn3Q499D0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn3Q499D0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.55■□□□□ 0.88
Foxn3Q499D0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Foxn3Q499D0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.54■□□□□ 0.88
Foxn3Q499D0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.54■□□□□ 0.88
Foxn3Q499D0 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.54■□□□□ 0.88
Foxn3Q499D0 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.54■□□□□ 0.88
Foxn3Q499D0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn3Q499D0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn3Q499D0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Foxn3Q499D0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Foxn3Q499D0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn3Q499D0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn3Q499D0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.53■□□□□ 0.88
Foxn3Q499D0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.53■□□□□ 0.88
Foxn3Q499D0 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.52■□□□□ 0.88
Foxn3Q499D0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxn3Q499D0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxn3Q499D0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.52■□□□□ 0.88
Foxn3Q499D0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Foxn3Q499D0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.52■□□□□ 0.88
Foxn3Q499D0 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.52■□□□□ 0.88
Foxn3Q499D0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxn3Q499D0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Foxn3Q499D0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Foxn3Q499D0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Foxn3Q499D0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxn3Q499D0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Gm42778-201ENSMUST00000199644 553 ntBASIC20.51■□□□□ 0.87
Foxn3Q499D0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxn3Q499D0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxn3Q499D0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms