Protein–RNA interactions for Protein: Q3U0P1

Palb2, Partner and localizer of BRCA2, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Palb2Q3U0P1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Palb2Q3U0P1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Gm15565-201ENSMUST00000118890 427 ntBASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Palb2Q3U0P1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Palb2Q3U0P1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Palb2Q3U0P1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Palb2Q3U0P1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Palb2Q3U0P1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.84■□□□□ 0.93
Palb2Q3U0P1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Palb2Q3U0P1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Palb2Q3U0P1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Palb2Q3U0P1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Palb2Q3U0P1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Palb2Q3U0P1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Palb2Q3U0P1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Palb2Q3U0P1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Palb2Q3U0P1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Palb2Q3U0P1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Palb2Q3U0P1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Palb2Q3U0P1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Palb2Q3U0P1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Palb2Q3U0P1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Palb2Q3U0P1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Palb2Q3U0P1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Palb2Q3U0P1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Palb2Q3U0P1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.82■□□□□ 0.92
Palb2Q3U0P1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.82■□□□□ 0.92
Palb2Q3U0P1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Palb2Q3U0P1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Dio3-201ENSMUST00000097228 1449 ntBASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.81■□□□□ 0.92
Palb2Q3U0P1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Palb2Q3U0P1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.79■□□□□ 0.92
Palb2Q3U0P1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Palb2Q3U0P1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Palb2Q3U0P1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Palb2Q3U0P1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Palb2Q3U0P1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Palb2Q3U0P1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Palb2Q3U0P1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Palb2Q3U0P1 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.78■□□□□ 0.92
Palb2Q3U0P1 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.78■□□□□ 0.92
Palb2Q3U0P1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Palb2Q3U0P1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Palb2Q3U0P1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Palb2Q3U0P1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Palb2Q3U0P1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Palb2Q3U0P1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Palb2Q3U0P1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms