Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc4Q3TCX3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Gm5408-201ENSMUST00000197998 747 ntBASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Khdc4Q3TCX3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.71■□□□□ 0.42
Khdc4Q3TCX3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
Khdc4Q3TCX3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc4Q3TCX3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Gm7290-201ENSMUST00000104990 617 ntBASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Gm13148-201ENSMUST00000118892 745 ntBASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Gm12918-201ENSMUST00000120234 636 ntBASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Gm15710-201ENSMUST00000121821 636 ntBASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Gm5075-201ENSMUST00000196916 622 ntBASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Khdc4Q3TCX3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc4Q3TCX3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc4Q3TCX3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc4Q3TCX3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc4Q3TCX3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc4Q3TCX3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc4Q3TCX3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Khdc4Q3TCX3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc4Q3TCX3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc4Q3TCX3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc4Q3TCX3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms