Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cul4aQ3TCH7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cul4aQ3TCH7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cul4aQ3TCH7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cul4aQ3TCH7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.64■□□□□ 0.73
Cul4aQ3TCH7 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.64■□□□□ 0.73
Cul4aQ3TCH7 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.64■□□□□ 0.73
Cul4aQ3TCH7 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.64■□□□□ 0.73
Cul4aQ3TCH7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cul4aQ3TCH7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cul4aQ3TCH7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cul4aQ3TCH7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cul4aQ3TCH7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cul4aQ3TCH7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cul4aQ3TCH7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.63■□□□□ 0.73
Cul4aQ3TCH7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cul4aQ3TCH7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Cul4aQ3TCH7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cul4aQ3TCH7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Gm6139-201ENSMUST00000079261 882 ntBASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cul4aQ3TCH7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cul4aQ3TCH7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cul4aQ3TCH7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cul4aQ3TCH7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cul4aQ3TCH7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cul4aQ3TCH7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cul4aQ3TCH7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Gm12821-201ENSMUST00000120022 600 ntBASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Gm27454-201ENSMUST00000185090 204 ntBASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cul4aQ3TCH7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cul4aQ3TCH7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cul4aQ3TCH7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cul4aQ3TCH7 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.58■□□□□ 0.73
Cul4aQ3TCH7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.58■□□□□ 0.73
Cul4aQ3TCH7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cul4aQ3TCH7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Cul4aQ3TCH7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cul4aQ3TCH7 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.58■□□□□ 0.72
Cul4aQ3TCH7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cul4aQ3TCH7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms