Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43cP86449 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43cP86449 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43cP86449 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43cP86449 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trim43cP86449 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.4■□□□□ 0.86
Trim43cP86449 Gm42778-201ENSMUST00000199644 553 ntBASIC20.4■□□□□ 0.86
Trim43cP86449 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43cP86449 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43cP86449 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43cP86449 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.4■□□□□ 0.86
Trim43cP86449 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43cP86449 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim43cP86449 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim43cP86449 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim43cP86449 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trim43cP86449 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43cP86449 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43cP86449 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.39■□□□□ 0.85
Trim43cP86449 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43cP86449 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43cP86449 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43cP86449 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim43cP86449 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim43cP86449 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43cP86449 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Trim43cP86449 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43cP86449 AV356131-201ENSMUST00000206201 750 ntBASIC20.38■□□□□ 0.85
Trim43cP86449 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.38■□□□□ 0.85
Trim43cP86449 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trim43cP86449 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43cP86449 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim43cP86449 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.37■□□□□ 0.85
Trim43cP86449 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43cP86449 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.37■□□□□ 0.85
Trim43cP86449 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43cP86449 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trim43cP86449 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43cP86449 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.37■□□□□ 0.85
Trim43cP86449 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43cP86449 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim43cP86449 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim43cP86449 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.37■□□□□ 0.85
Trim43cP86449 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43cP86449 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43cP86449 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43cP86449 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43cP86449 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Trim43cP86449 Gm15039-201ENSMUST00000118914 875 ntBASIC20.36■□□□□ 0.85
Trim43cP86449 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Trim43cP86449 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43cP86449 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43cP86449 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim43cP86449 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.36■□□□□ 0.85
Trim43cP86449 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43cP86449 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43cP86449 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim43cP86449 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43cP86449 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43cP86449 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43cP86449 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trim43cP86449 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim43cP86449 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trim43cP86449 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43cP86449 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim43cP86449 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43cP86449 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43cP86449 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim43cP86449 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Trim43cP86449 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim43cP86449 Gm6420-201ENSMUST00000193885 723 ntBASIC20.34■□□□□ 0.85
Trim43cP86449 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.34■□□□□ 0.85
Trim43cP86449 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim43cP86449 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Trim43cP86449 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43cP86449 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43cP86449 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim43cP86449 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim43cP86449 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim43cP86449 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 Gm18671-201ENSMUST00000214826 683 ntBASIC20.32■□□□□ 0.84
Trim43cP86449 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.32■□□□□ 0.84
Trim43cP86449 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.32■□□□□ 0.84
Trim43cP86449 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43cP86449 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trim43cP86449 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim43cP86449 Gm7514-201ENSMUST00000209475 934 ntBASIC20.31■□□□□ 0.84
Trim43cP86449 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim43cP86449 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trim43cP86449 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim43cP86449 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms