Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Irf3P70671 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf3P70671 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Irf3P70671 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Irf3P70671 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf3P70671 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf3P70671 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Irf3P70671 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.36■□□□□ 0.85
Irf3P70671 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf3P70671 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf3P70671 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf3P70671 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf3P70671 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf3P70671 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.35■□□□□ 0.85
Irf3P70671 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.35■□□□□ 0.85
Irf3P70671 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf3P70671 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Irf3P70671 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf3P70671 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Irf3P70671 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf3P70671 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Irf3P70671 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Irf3P70671 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.34■□□□□ 0.85
Irf3P70671 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Irf3P70671 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf3P70671 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.34■□□□□ 0.85
Irf3P70671 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf3P70671 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Irf3P70671 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Irf3P70671 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Irf3P70671 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf3P70671 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf3P70671 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf3P70671 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Irf3P70671 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.33■□□□□ 0.84
Irf3P70671 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Irf3P70671 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf3P70671 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf3P70671 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.33■□□□□ 0.84
Irf3P70671 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Irf3P70671 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf3P70671 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Irf3P70671 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf3P70671 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf3P70671 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf3P70671 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf3P70671 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf3P70671 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf3P70671 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf3P70671 Gm22240-201ENSMUST00000175225 82 ntBASIC20.32■□□□□ 0.84
Irf3P70671 Gm27275-201ENSMUST00000184318 272 ntBASIC20.32■□□□□ 0.84
Irf3P70671 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf3P70671 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.32■□□□□ 0.84
Irf3P70671 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf3P70671 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf3P70671 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.32■□□□□ 0.84
Irf3P70671 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf3P70671 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf3P70671 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf3P70671 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf3P70671 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf3P70671 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.31■□□□□ 0.84
Irf3P70671 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.31■□□□□ 0.84
Irf3P70671 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.31■□□□□ 0.84
Irf3P70671 Gm13168-201ENSMUST00000121771 632 ntBASIC20.31■□□□□ 0.84
Irf3P70671 Gm22325-201ENSMUST00000158904 308 ntBASIC20.31■□□□□ 0.84
Irf3P70671 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf3P70671 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf3P70671 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf3P70671 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf3P70671 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf3P70671 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf3P70671 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Irf3P70671 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Irf3P70671 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf3P70671 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.3■□□□□ 0.84
Irf3P70671 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf3P70671 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.3■□□□□ 0.84
Irf3P70671 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Irf3P70671 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Irf3P70671 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Irf3P70671 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf3P70671 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Irf3P70671 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf3P70671 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf3P70671 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf3P70671 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Irf3P70671 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Irf3P70671 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf3P70671 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf3P70671 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf3P70671 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Irf3P70671 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf3P70671 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.28■□□□□ 0.84
Irf3P70671 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Irf3P70671 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Irf3P70671 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf3P70671 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Irf3P70671 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf3P70671 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms