Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.84■□□□□ 0.45
Slc9a3r1P70441 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.84■□□□□ 0.45
Slc9a3r1P70441 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Slc9a3r1P70441 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc9a3r1P70441 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc9a3r1P70441 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.83■□□□□ 0.45
Slc9a3r1P70441 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Slc9a3r1P70441 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Slc9a3r1P70441 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc9a3r1P70441 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Slc9a3r1P70441 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.83■□□□□ 0.44
Slc9a3r1P70441 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.83■□□□□ 0.44
Slc9a3r1P70441 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a3r1P70441 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a3r1P70441 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a3r1P70441 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.83■□□□□ 0.44
Slc9a3r1P70441 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc9a3r1P70441 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Gm20049-201ENSMUST00000219950 730 ntBASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a3r1P70441 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Gm26524-201ENSMUST00000192339 390 ntBASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a3r1P70441 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Gm20760-201ENSMUST00000179197 648 ntBASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Rab3c-203ENSMUST00000224180 967 ntBASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a3r1P70441 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a3r1P70441 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a3r1P70441 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a3r1P70441 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a3r1P70441 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a3r1P70441 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms