Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Cux2P70298 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cux2P70298 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cux2P70298 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC31.03■■■□□ 2.56
Cux2P70298 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC31.03■■■□□ 2.56
Cux2P70298 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC31.03■■■□□ 2.56
Cux2P70298 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Cux2P70298 AC152827.1-201ENSMUST00000221143 2189 ntBASIC31.03■■■□□ 2.56
Cux2P70298 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cux2P70298 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cux2P70298 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Cux2P70298 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cux2P70298 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Cux2P70298 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Cux2P70298 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Cux2P70298 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Cux2P70298 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cux2P70298 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cux2P70298 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cux2P70298 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cux2P70298 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Cux2P70298 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Cux2P70298 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC31.01■■■□□ 2.55
Cux2P70298 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
Cux2P70298 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Cux2P70298 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Cux2P70298 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Cux2P70298 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cux2P70298 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cux2P70298 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC30.99■■■□□ 2.55
Cux2P70298 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cux2P70298 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Cux2P70298 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cux2P70298 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Cux2P70298 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC30.98■■■□□ 2.55
Cux2P70298 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cux2P70298 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cux2P70298 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Cux2P70298 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC30.97■■■□□ 2.55
Cux2P70298 Snhg20-203ENSMUST00000182811 2153 ntBASIC30.97■■■□□ 2.55
Cux2P70298 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cux2P70298 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cux2P70298 Gm12382-201ENSMUST00000122005 922 ntBASIC30.97■■■□□ 2.55
Cux2P70298 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cux2P70298 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cux2P70298 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cux2P70298 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC30.97■■■□□ 2.55
Cux2P70298 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Cux2P70298 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cux2P70298 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Cux2P70298 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC30.96■■■□□ 2.55
Cux2P70298 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Cux2P70298 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC30.96■■■□□ 2.55
Cux2P70298 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Cux2P70298 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cux2P70298 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Cux2P70298 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Cux2P70298 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Cux2P70298 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Cux2P70298 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
Cux2P70298 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Cux2P70298 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Cux2P70298 Gm45058-201ENSMUST00000205810 766 ntBASIC30.95■■■□□ 2.54
Cux2P70298 AC159205.3-201ENSMUST00000224614 874 ntBASIC30.95■■■□□ 2.54
Cux2P70298 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Cux2P70298 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
Cux2P70298 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Cux2P70298 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Cux2P70298 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Cux2P70298 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
Cux2P70298 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cux2P70298 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Cux2P70298 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
Cux2P70298 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Cux2P70298 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC30.93■■■□□ 2.54
Cux2P70298 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC30.93■■■□□ 2.54
Cux2P70298 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
Cux2P70298 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cux2P70298 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cux2P70298 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cux2P70298 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Cux2P70298 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
Cux2P70298 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Cux2P70298 Gm17971-201ENSMUST00000190239 806 ntBASIC30.92■■■□□ 2.54
Cux2P70298 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC30.92■■■□□ 2.54
Cux2P70298 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Cux2P70298 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Cux2P70298 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Cux2P70298 AC154471.1-201ENSMUST00000224418 436 ntBASIC30.91■■■□□ 2.54
Cux2P70298 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Cux2P70298 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Cux2P70298 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC30.91■■■□□ 2.54
Cux2P70298 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cux2P70298 Gm18101-201ENSMUST00000215769 548 ntBASIC30.9■■■□□ 2.54
Cux2P70298 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cux2P70298 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
Cux2P70298 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cux2P70298 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Cux2P70298 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC30.9■■■□□ 2.54
Cux2P70298 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms