Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.35■□□□□ 0.53
Traf6P70196 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf6P70196 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.35■□□□□ 0.53
Traf6P70196 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf6P70196 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf6P70196 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf6P70196 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Traf6P70196 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.35■□□□□ 0.53
Traf6P70196 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf6P70196 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Traf6P70196 Gm40848-201ENSMUST00000221998 324 ntBASIC18.35■□□□□ 0.53
Traf6P70196 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Traf6P70196 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf6P70196 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf6P70196 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Traf6P70196 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.35■□□□□ 0.53
Traf6P70196 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf6P70196 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf6P70196 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf6P70196 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Traf6P70196 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Traf6P70196 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf6P70196 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf6P70196 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf6P70196 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Traf6P70196 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf6P70196 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Traf6P70196 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.34■□□□□ 0.53
Traf6P70196 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.34■□□□□ 0.53
Traf6P70196 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf6P70196 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Traf6P70196 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Traf6P70196 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Traf6P70196 Gm27801-201ENSMUST00000184174 223 ntBASIC18.33■□□□□ 0.52
Traf6P70196 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Traf6P70196 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.33■□□□□ 0.52
Traf6P70196 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Traf6P70196 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf6P70196 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Traf6P70196 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.33■□□□□ 0.52
Traf6P70196 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.33■□□□□ 0.52
Traf6P70196 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Traf6P70196 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.32■□□□□ 0.52
Traf6P70196 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.32■□□□□ 0.52
Traf6P70196 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Traf6P70196 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.32■□□□□ 0.52
Traf6P70196 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf6P70196 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Traf6P70196 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.31■□□□□ 0.52
Traf6P70196 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Traf6P70196 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.31■□□□□ 0.52
Traf6P70196 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Traf6P70196 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Traf6P70196 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Traf6P70196 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.31■□□□□ 0.52
Traf6P70196 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
Traf6P70196 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf6P70196 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Traf6P70196 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Traf6P70196 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.31■□□□□ 0.52
Traf6P70196 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.3■□□□□ 0.52
Traf6P70196 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Traf6P70196 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf6P70196 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Traf6P70196 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Traf6P70196 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf6P70196 Gm43017-201ENSMUST00000198296 752 ntBASIC18.3■□□□□ 0.52
Traf6P70196 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf6P70196 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf6P70196 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Traf6P70196 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf6P70196 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf6P70196 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf6P70196 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.3■□□□□ 0.52
Traf6P70196 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Traf6P70196 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.29■□□□□ 0.52
Traf6P70196 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf6P70196 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms