Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ybx1P62960 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ybx1P62960 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ybx1P62960 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ybx1P62960 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ybx1P62960 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.17■□□□□ 0.66
Ybx1P62960 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ybx1P62960 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ybx1P62960 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ybx1P62960 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ybx1P62960 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ybx1P62960 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ybx1P62960 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ybx1P62960 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ybx1P62960 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.16■□□□□ 0.66
Ybx1P62960 Gm22325-201ENSMUST00000158904 308 ntBASIC19.16■□□□□ 0.66
Ybx1P62960 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.16■□□□□ 0.66
Ybx1P62960 Gm10698-201ENSMUST00000182663 604 ntBASIC19.16■□□□□ 0.66
Ybx1P62960 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ybx1P62960 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ybx1P62960 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.16■□□□□ 0.66
Ybx1P62960 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ybx1P62960 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ybx1P62960 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ybx1P62960 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ybx1P62960 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ybx1P62960 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ybx1P62960 Gm2399-201ENSMUST00000104944 225 ntBASIC19.15■□□□□ 0.66
Ybx1P62960 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ybx1P62960 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.15■□□□□ 0.66
Ybx1P62960 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.15■□□□□ 0.66
Ybx1P62960 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.15■□□□□ 0.66
Ybx1P62960 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.15■□□□□ 0.66
Ybx1P62960 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ybx1P62960 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ybx1P62960 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ybx1P62960 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ybx1P62960 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ybx1P62960 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.14■□□□□ 0.65
Ybx1P62960 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.14■□□□□ 0.65
Ybx1P62960 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ybx1P62960 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ybx1P62960 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ybx1P62960 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ybx1P62960 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ybx1P62960 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ybx1P62960 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Ybx1P62960 Gm6576-201ENSMUST00000169678 883 ntBASIC19.13■□□□□ 0.65
Ybx1P62960 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.13■□□□□ 0.65
Ybx1P62960 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ybx1P62960 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.13■□□□□ 0.65
Ybx1P62960 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Ybx1P62960 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ybx1P62960 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.13■□□□□ 0.65
Ybx1P62960 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ybx1P62960 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ybx1P62960 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ybx1P62960 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.12■□□□□ 0.65
Ybx1P62960 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ybx1P62960 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.12■□□□□ 0.65
Ybx1P62960 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Ybx1P62960 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.12■□□□□ 0.65
Ybx1P62960 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.12■□□□□ 0.65
Ybx1P62960 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Ybx1P62960 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ybx1P62960 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ybx1P62960 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ybx1P62960 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ybx1P62960 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Ybx1P62960 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ybx1P62960 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Ybx1P62960 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ybx1P62960 Gm715-201ENSMUST00000117865 831 ntBASIC19.11■□□□□ 0.65
Ybx1P62960 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ybx1P62960 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ybx1P62960 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms