Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Msh6P54276 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Msh6P54276 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC23.87■■□□□ 1.41
Msh6P54276 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Msh6P54276 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Msh6P54276 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Msh6P54276 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Msh6P54276 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Msh6P54276 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Msh6P54276 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Msh6P54276 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Msh6P54276 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Msh6P54276 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Msh6P54276 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.85■■□□□ 1.41
Msh6P54276 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Msh6P54276 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Msh6P54276 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Msh6P54276 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Msh6P54276 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Msh6P54276 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Msh6P54276 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC23.85■■□□□ 1.41
Msh6P54276 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Msh6P54276 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Msh6P54276 Gm15565-201ENSMUST00000118890 427 ntBASIC23.84■■□□□ 1.41
Msh6P54276 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC23.84■■□□□ 1.41
Msh6P54276 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Msh6P54276 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Msh6P54276 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Msh6P54276 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Msh6P54276 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Msh6P54276 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.83■■□□□ 1.41
Msh6P54276 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Msh6P54276 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Msh6P54276 Gm43672-201ENSMUST00000199072 1731 ntBASIC23.83■■□□□ 1.41
Msh6P54276 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Msh6P54276 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Msh6P54276 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Msh6P54276 Nrn1-203ENSMUST00000223611 1443 ntBASIC23.83■■□□□ 1.41
Msh6P54276 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Msh6P54276 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Msh6P54276 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Msh6P54276 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Msh6P54276 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Msh6P54276 Gm43545-201ENSMUST00000196765 2779 ntBASIC23.82■■□□□ 1.4
Msh6P54276 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Msh6P54276 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Msh6P54276 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Msh6P54276 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Msh6P54276 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Msh6P54276 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.81■■□□□ 1.4
Msh6P54276 Gm37055-201ENSMUST00000191866 133 ntBASIC23.81■■□□□ 1.4
Msh6P54276 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23.81■■□□□ 1.4
Msh6P54276 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Msh6P54276 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Msh6P54276 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC23.81■■□□□ 1.4
Msh6P54276 Notumos-201ENSMUST00000151998 2659 ntBASIC23.81■■□□□ 1.4
Msh6P54276 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Msh6P54276 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC23.81■■□□□ 1.4
Msh6P54276 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Msh6P54276 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Msh6P54276 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Msh6P54276 Gm2399-201ENSMUST00000104944 225 ntBASIC23.8■■□□□ 1.4
Msh6P54276 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Msh6P54276 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Msh6P54276 Mir1199-201ENSMUST00000117015 119 ntBASIC23.8■■□□□ 1.4
Msh6P54276 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
Msh6P54276 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC23.8■■□□□ 1.4
Msh6P54276 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Msh6P54276 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Msh6P54276 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Msh6P54276 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Msh6P54276 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.8■■□□□ 1.4
Msh6P54276 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Msh6P54276 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
Msh6P54276 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
Msh6P54276 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Msh6P54276 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Msh6P54276 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Msh6P54276 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Msh6P54276 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Msh6P54276 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Msh6P54276 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.78■■□□□ 1.4
Msh6P54276 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Msh6P54276 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Msh6P54276 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Msh6P54276 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.78■■□□□ 1.4
Msh6P54276 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Msh6P54276 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC23.78■■□□□ 1.4
Msh6P54276 Gm11643-201ENSMUST00000119578 864 ntBASIC23.78■■□□□ 1.4
Msh6P54276 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC23.78■■□□□ 1.4
Msh6P54276 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Msh6P54276 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Msh6P54276 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Msh6P54276 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.77■■□□□ 1.4
Msh6P54276 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Msh6P54276 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Msh6P54276 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Msh6P54276 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC23.77■■□□□ 1.4
Msh6P54276 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Msh6P54276 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms