Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.81■□□□□ 0.92
Nek1P51954 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek1P51954 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Nek1P51954 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek1P51954 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek1P51954 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek1P51954 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nek1P51954 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek1P51954 Gm37179-201ENSMUST00000194862 823 ntBASIC20.8■□□□□ 0.92
Nek1P51954 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.8■□□□□ 0.92
Nek1P51954 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.8■□□□□ 0.92
Nek1P51954 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek1P51954 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek1P51954 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek1P51954 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek1P51954 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Nek1P51954 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 Gm11421-201ENSMUST00000122124 294 ntBASIC20.79■□□□□ 0.92
Nek1P51954 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nek1P51954 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Nek1P51954 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.79■□□□□ 0.92
Nek1P51954 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nek1P51954 Grk6-206ENSMUST00000224995 2971 ntBASIC20.79■□□□□ 0.92
Nek1P51954 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Nek1P51954 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.78■□□□□ 0.92
Nek1P51954 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.78■□□□□ 0.92
Nek1P51954 Gm10849-201ENSMUST00000100397 618 ntBASIC20.78■□□□□ 0.92
Nek1P51954 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Nek1P51954 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nek1P51954 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek1P51954 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nek1P51954 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nek1P51954 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nek1P51954 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nek1P51954 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Nek1P51954 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nek1P51954 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nek1P51954 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.77■□□□□ 0.92
Nek1P51954 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Nek1P51954 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nek1P51954 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nek1P51954 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nek1P51954 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nek1P51954 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nek1P51954 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nek1P51954 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.76■□□□□ 0.91
Nek1P51954 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nek1P51954 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.76■□□□□ 0.91
Nek1P51954 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nek1P51954 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nek1P51954 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nek1P51954 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nek1P51954 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nek1P51954 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nek1P51954 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nek1P51954 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Nek1P51954 Gm42778-201ENSMUST00000199644 553 ntBASIC20.75■□□□□ 0.91
Nek1P51954 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nek1P51954 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nek1P51954 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nek1P51954 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Rarb-207ENSMUST00000225921 2756 ntBASIC20.74■□□□□ 0.91
Nek1P51954 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nek1P51954 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nek1P51954 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nek1P51954 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nek1P51954 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nek1P51954 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.73■□□□□ 0.91
Nek1P51954 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nek1P51954 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nek1P51954 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nek1P51954 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms