Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gdf6P43028 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gdf6P43028 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gdf6P43028 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gdf6P43028 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gdf6P43028 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.7■□□□□ 0.74
Gdf6P43028 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.7■□□□□ 0.74
Gdf6P43028 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.7■□□□□ 0.74
Gdf6P43028 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gdf6P43028 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gdf6P43028 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gdf6P43028 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gdf6P43028 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Gdf6P43028 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.69■□□□□ 0.74
Gdf6P43028 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gdf6P43028 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gdf6P43028 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gdf6P43028 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gdf6P43028 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gdf6P43028 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Gdf6P43028 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gdf6P43028 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.68■□□□□ 0.74
Gdf6P43028 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gdf6P43028 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gdf6P43028 Gm44549-201ENSMUST00000208351 577 ntBASIC19.68■□□□□ 0.74
Gdf6P43028 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.68■□□□□ 0.74
Gdf6P43028 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gdf6P43028 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Gdf6P43028 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gdf6P43028 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gdf6P43028 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gdf6P43028 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gdf6P43028 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gdf6P43028 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Gdf6P43028 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gdf6P43028 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.67■□□□□ 0.74
Gdf6P43028 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Gdf6P43028 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gdf6P43028 Gm2559-201ENSMUST00000201323 363 ntBASIC19.67■□□□□ 0.74
Gdf6P43028 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Gdf6P43028 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gdf6P43028 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gdf6P43028 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gdf6P43028 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gdf6P43028 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gdf6P43028 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gdf6P43028 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Gdf6P43028 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Gdf6P43028 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gdf6P43028 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gdf6P43028 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gdf6P43028 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gdf6P43028 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.65■□□□□ 0.74
Gdf6P43028 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gdf6P43028 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gdf6P43028 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gdf6P43028 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gdf6P43028 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gdf6P43028 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gdf6P43028 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gdf6P43028 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gdf6P43028 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.64■□□□□ 0.73
Gdf6P43028 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gdf6P43028 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gdf6P43028 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gdf6P43028 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gdf6P43028 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gdf6P43028 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gdf6P43028 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Gdf6P43028 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gdf6P43028 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gdf6P43028 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gdf6P43028 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gdf6P43028 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Gdf6P43028 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gdf6P43028 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gdf6P43028 Dio3-201ENSMUST00000097228 1449 ntBASIC19.63■□□□□ 0.73
Gdf6P43028 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.63■□□□□ 0.73
Gdf6P43028 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gdf6P43028 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Gdf6P43028 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gdf6P43028 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gdf6P43028 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gdf6P43028 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.62■□□□□ 0.73
Gdf6P43028 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gdf6P43028 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gdf6P43028 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gdf6P43028 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gdf6P43028 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gdf6P43028 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Gdf6P43028 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gdf6P43028 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gdf6P43028 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gdf6P43028 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gdf6P43028 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gdf6P43028 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.61■□□□□ 0.73
Gdf6P43028 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gdf6P43028 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gdf6P43028 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gdf6P43028 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms