Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a11P31650 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a11P31650 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a11P31650 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.69■□□□□ 0.42
Slc6a11P31650 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a11P31650 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a11P31650 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a11P31650 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a11P31650 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Slc6a11P31650 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Slc6a11P31650 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a11P31650 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a11P31650 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a11P31650 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a11P31650 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a11P31650 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.68■□□□□ 0.42
Slc6a11P31650 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc6a11P31650 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Slc6a11P31650 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a11P31650 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.68■□□□□ 0.42
Slc6a11P31650 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Slc6a11P31650 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc6a11P31650 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc6a11P31650 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a11P31650 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Slc6a11P31650 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a11P31650 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Slc6a11P31650 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a11P31650 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a11P31650 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a11P31650 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a11P31650 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a11P31650 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Slc6a11P31650 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Slc6a11P31650 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.66■□□□□ 0.42
Slc6a11P31650 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.66■□□□□ 0.42
Slc6a11P31650 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.66■□□□□ 0.42
Slc6a11P31650 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc6a11P31650 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc6a11P31650 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc6a11P31650 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a11P31650 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.65■□□□□ 0.42
Slc6a11P31650 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Slc6a11P31650 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.65■□□□□ 0.42
Slc6a11P31650 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a11P31650 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Slc6a11P31650 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a11P31650 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.64■□□□□ 0.41
Slc6a11P31650 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Slc6a11P31650 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a11P31650 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a11P31650 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a11P31650 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a11P31650 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a11P31650 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a11P31650 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a11P31650 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Slc6a11P31650 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
Slc6a11P31650 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Slc6a11P31650 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Slc6a11P31650 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.63■□□□□ 0.41
Slc6a11P31650 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Slc6a11P31650 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a11P31650 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a11P31650 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms