Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
Nedd8P29595 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nedd8P29595 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.32■□□□□ 0.36
Nedd8P29595 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nedd8P29595 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nedd8P29595 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nedd8P29595 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nedd8P29595 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.31■□□□□ 0.36
Nedd8P29595 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nedd8P29595 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd8P29595 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nedd8P29595 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.3■□□□□ 0.36
Nedd8P29595 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.3■□□□□ 0.36
Nedd8P29595 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nedd8P29595 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nedd8P29595 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.29■□□□□ 0.36
Nedd8P29595 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nedd8P29595 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nedd8P29595 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nedd8P29595 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nedd8P29595 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nedd8P29595 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nedd8P29595 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nedd8P29595 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nedd8P29595 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.29■□□□□ 0.36
Nedd8P29595 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nedd8P29595 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nedd8P29595 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.28■□□□□ 0.36
Nedd8P29595 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nedd8P29595 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.28■□□□□ 0.36
Nedd8P29595 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nedd8P29595 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nedd8P29595 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Nedd8P29595 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nedd8P29595 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nedd8P29595 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nedd8P29595 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nedd8P29595 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Nedd8P29595 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nedd8P29595 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.26■□□□□ 0.35
Nedd8P29595 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.26■□□□□ 0.35
Nedd8P29595 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms