Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.64■□□□□ 0.41
ApoeP08226 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ApoeP08226 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.64■□□□□ 0.41
ApoeP08226 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ApoeP08226 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ApoeP08226 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.64■□□□□ 0.41
ApoeP08226 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ApoeP08226 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.64■□□□□ 0.41
ApoeP08226 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ApoeP08226 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ApoeP08226 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.63■□□□□ 0.41
ApoeP08226 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ApoeP08226 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ApoeP08226 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ApoeP08226 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ApoeP08226 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ApoeP08226 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ApoeP08226 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ApoeP08226 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ApoeP08226 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ApoeP08226 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ApoeP08226 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ApoeP08226 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.62■□□□□ 0.41
ApoeP08226 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ApoeP08226 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ApoeP08226 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
ApoeP08226 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ApoeP08226 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ApoeP08226 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ApoeP08226 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ApoeP08226 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.61■□□□□ 0.41
ApoeP08226 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ApoeP08226 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ApoeP08226 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ApoeP08226 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ApoeP08226 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ApoeP08226 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.61■□□□□ 0.41
ApoeP08226 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ApoeP08226 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ApoeP08226 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.61■□□□□ 0.41
ApoeP08226 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ApoeP08226 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ApoeP08226 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
ApoeP08226 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ApoeP08226 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ApoeP08226 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
ApoeP08226 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ApoeP08226 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ApoeP08226 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ApoeP08226 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ApoeP08226 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ApoeP08226 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ApoeP08226 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ApoeP08226 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ApoeP08226 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
ApoeP08226 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ApoeP08226 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ApoeP08226 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ApoeP08226 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ApoeP08226 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ApoeP08226 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ApoeP08226 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ApoeP08226 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ApoeP08226 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.59■□□□□ 0.41
ApoeP08226 Gm5812-201ENSMUST00000061073 957 ntBASIC17.59■□□□□ 0.41
ApoeP08226 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ApoeP08226 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ApoeP08226 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ApoeP08226 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ApoeP08226 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ApoeP08226 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ApoeP08226 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ApoeP08226 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.58■□□□□ 0.41
ApoeP08226 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ApoeP08226 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ApoeP08226 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.58■□□□□ 0.41
ApoeP08226 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ApoeP08226 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ApoeP08226 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ApoeP08226 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ApoeP08226 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.58■□□□□ 0.4
ApoeP08226 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ApoeP08226 Gm9959-201ENSMUST00000068277 390 ntBASIC17.58■□□□□ 0.4
ApoeP08226 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ApoeP08226 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ApoeP08226 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.57■□□□□ 0.4
ApoeP08226 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ApoeP08226 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms