Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn3O88705 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn3O88705 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.86■□□□□ 0.45
Hcn3O88705 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Hcn3O88705 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn3O88705 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn3O88705 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Hcn3O88705 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn3O88705 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn3O88705 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.85■□□□□ 0.45
Hcn3O88705 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.85■□□□□ 0.45
Hcn3O88705 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn3O88705 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn3O88705 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn3O88705 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn3O88705 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn3O88705 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Hcn3O88705 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn3O88705 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn3O88705 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn3O88705 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.84■□□□□ 0.45
Hcn3O88705 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.84■□□□□ 0.45
Hcn3O88705 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.84■□□□□ 0.45
Hcn3O88705 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Hcn3O88705 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.84■□□□□ 0.45
Hcn3O88705 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.84■□□□□ 0.45
Hcn3O88705 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn3O88705 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.84■□□□□ 0.45
Hcn3O88705 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn3O88705 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn3O88705 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn3O88705 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn3O88705 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hcn3O88705 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Hcn3O88705 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Hcn3O88705 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hcn3O88705 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Hcn3O88705 Gm21956-201ENSMUST00000179946 522 ntBASIC17.83■□□□□ 0.44
Hcn3O88705 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.83■□□□□ 0.44
Hcn3O88705 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.83■□□□□ 0.44
Hcn3O88705 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hcn3O88705 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hcn3O88705 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hcn3O88705 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hcn3O88705 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hcn3O88705 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.83■□□□□ 0.44
Hcn3O88705 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hcn3O88705 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Hcn3O88705 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Hcn3O88705 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn3O88705 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn3O88705 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn3O88705 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn3O88705 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.82■□□□□ 0.44
Hcn3O88705 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Hcn3O88705 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Hcn3O88705 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn3O88705 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.82■□□□□ 0.44
Hcn3O88705 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn3O88705 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn3O88705 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn3O88705 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn3O88705 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn3O88705 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn3O88705 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hcn3O88705 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn3O88705 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn3O88705 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn3O88705 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Hcn3O88705 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn3O88705 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn3O88705 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.8■□□□□ 0.44
Hcn3O88705 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn3O88705 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Hcn3O88705 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn3O88705 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn3O88705 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn3O88705 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.8■□□□□ 0.44
Hcn3O88705 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.8■□□□□ 0.44
Hcn3O88705 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.8■□□□□ 0.44
Hcn3O88705 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn3O88705 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn3O88705 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn3O88705 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn3O88705 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.8■□□□□ 0.44
Hcn3O88705 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn3O88705 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.79■□□□□ 0.44
Hcn3O88705 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn3O88705 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn3O88705 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn3O88705 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn3O88705 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Hcn3O88705 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.79■□□□□ 0.44
Hcn3O88705 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn3O88705 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn3O88705 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn3O88705 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.79■□□□□ 0.44
Hcn3O88705 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn3O88705 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms