Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.42■□□□□ 0.38
Tulp3O88413 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.42■□□□□ 0.38
Tulp3O88413 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tulp3O88413 Golgb1-201ENSMUST00000023534 498 ntBASIC17.42■□□□□ 0.38
Tulp3O88413 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tulp3O88413 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.42■□□□□ 0.38
Tulp3O88413 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tulp3O88413 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tulp3O88413 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tulp3O88413 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.41■□□□□ 0.38
Tulp3O88413 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.41■□□□□ 0.38
Tulp3O88413 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tulp3O88413 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tulp3O88413 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.4■□□□□ 0.38
Tulp3O88413 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Tulp3O88413 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.4■□□□□ 0.38
Tulp3O88413 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Tulp3O88413 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.4■□□□□ 0.38
Tulp3O88413 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tulp3O88413 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tulp3O88413 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tulp3O88413 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tulp3O88413 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tulp3O88413 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tulp3O88413 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tulp3O88413 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tulp3O88413 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Tulp3O88413 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.39■□□□□ 0.37
Tulp3O88413 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tulp3O88413 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tulp3O88413 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tulp3O88413 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.39■□□□□ 0.37
Tulp3O88413 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.39■□□□□ 0.37
Tulp3O88413 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tulp3O88413 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tulp3O88413 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tulp3O88413 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tulp3O88413 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tulp3O88413 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tulp3O88413 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tulp3O88413 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.38■□□□□ 0.37
Tulp3O88413 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Tulp3O88413 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tulp3O88413 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tulp3O88413 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tulp3O88413 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tulp3O88413 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tulp3O88413 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Tulp3O88413 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tulp3O88413 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Tulp3O88413 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.37■□□□□ 0.37
Tulp3O88413 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.37■□□□□ 0.37
Tulp3O88413 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tulp3O88413 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tulp3O88413 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.37■□□□□ 0.37
Tulp3O88413 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tulp3O88413 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tulp3O88413 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tulp3O88413 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tulp3O88413 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tulp3O88413 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tulp3O88413 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.36■□□□□ 0.37
Tulp3O88413 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tulp3O88413 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tulp3O88413 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms