Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr3O88393 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr3O88393 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr3O88393 Gm15565-201ENSMUST00000118890 427 ntBASIC17.79■□□□□ 0.44
Tgfbr3O88393 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.79■□□□□ 0.44
Tgfbr3O88393 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.79■□□□□ 0.44
Tgfbr3O88393 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr3O88393 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr3O88393 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr3O88393 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tgfbr3O88393 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr3O88393 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfbr3O88393 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Mir1199-201ENSMUST00000117015 119 ntBASIC17.77■□□□□ 0.44
Tgfbr3O88393 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Gm37055-201ENSMUST00000191866 133 ntBASIC17.77■□□□□ 0.44
Tgfbr3O88393 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.77■□□□□ 0.44
Tgfbr3O88393 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfbr3O88393 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.77■□□□□ 0.43
Tgfbr3O88393 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tgfbr3O88393 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tgfbr3O88393 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tgfbr3O88393 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tgfbr3O88393 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfbr3O88393 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.76■□□□□ 0.43
Tgfbr3O88393 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.75■□□□□ 0.43
Tgfbr3O88393 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfbr3O88393 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.74■□□□□ 0.43
Tgfbr3O88393 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfbr3O88393 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfbr3O88393 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.73■□□□□ 0.43
Tgfbr3O88393 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.73■□□□□ 0.43
Tgfbr3O88393 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tgfbr3O88393 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms