Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Gm10139O88245 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Gm12821-201ENSMUST00000120022 600 ntBASIC11.39□□□□□ -0.59
Gm10139O88245 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.39□□□□□ -0.59
Gm10139O88245 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC11.39□□□□□ -0.59
Gm10139O88245 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm10139O88245 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Gm10139O88245 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC11.39□□□□□ -0.59
Gm10139O88245 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm10139O88245 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm10139O88245 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm10139O88245 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Gm10139O88245 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC11.38□□□□□ -0.59
Gm10139O88245 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm10139O88245 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gm10139O88245 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.37□□□□□ -0.59
Gm10139O88245 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Gm10139O88245 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Gm10139O88245 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Gm45141-201ENSMUST00000206502 1888 ntBASIC11.37□□□□□ -0.59
Gm10139O88245 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Gm10139O88245 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm10139O88245 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Gm10139O88245 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm10139O88245 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Gm10139O88245 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Gm10139O88245 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Gm10139O88245 Gm26833-201ENSMUST00000180899 440 ntBASIC11.36□□□□□ -0.59
Gm10139O88245 Gm27454-201ENSMUST00000185090 204 ntBASIC11.36□□□□□ -0.59
Gm10139O88245 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm10139O88245 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.36□□□□□ -0.59
Gm10139O88245 Gm6139-201ENSMUST00000079261 882 ntBASIC11.36□□□□□ -0.59
Gm10139O88245 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Gm10139O88245 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Gm10139O88245 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10139O88245 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms