Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.71■□□□□ 0.59
Phox2bO35690 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phox2bO35690 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phox2bO35690 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.71■□□□□ 0.59
Phox2bO35690 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phox2bO35690 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Phox2bO35690 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.7■□□□□ 0.58
Phox2bO35690 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Phox2bO35690 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Phox2bO35690 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
Phox2bO35690 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Phox2bO35690 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Phox2bO35690 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Phox2bO35690 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Phox2bO35690 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Phox2bO35690 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Phox2bO35690 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phox2bO35690 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Phox2bO35690 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.69■□□□□ 0.58
Phox2bO35690 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phox2bO35690 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phox2bO35690 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phox2bO35690 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.69■□□□□ 0.58
Phox2bO35690 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.69■□□□□ 0.58
Phox2bO35690 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.69■□□□□ 0.58
Phox2bO35690 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Phox2bO35690 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phox2bO35690 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phox2bO35690 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phox2bO35690 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Phox2bO35690 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phox2bO35690 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Phox2bO35690 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phox2bO35690 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phox2bO35690 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.68■□□□□ 0.58
Phox2bO35690 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phox2bO35690 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.68■□□□□ 0.58
Phox2bO35690 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Phox2bO35690 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.68■□□□□ 0.58
Phox2bO35690 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phox2bO35690 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Phox2bO35690 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phox2bO35690 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phox2bO35690 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Phox2bO35690 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Phox2bO35690 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Phox2bO35690 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC18.67■□□□□ 0.58
Phox2bO35690 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Phox2bO35690 Gm7461-201ENSMUST00000058918 827 ntBASIC18.67■□□□□ 0.58
Phox2bO35690 Gm15823-201ENSMUST00000064305 670 ntBASIC18.67■□□□□ 0.58
Phox2bO35690 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Phox2bO35690 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.67■□□□□ 0.58
Phox2bO35690 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Phox2bO35690 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Phox2bO35690 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phox2bO35690 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phox2bO35690 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phox2bO35690 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Phox2bO35690 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.66■□□□□ 0.58
Phox2bO35690 Gm9103-201ENSMUST00000119371 405 ntBASIC18.66■□□□□ 0.58
Phox2bO35690 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Phox2bO35690 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Phox2bO35690 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Phox2bO35690 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Phox2bO35690 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Phox2bO35690 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Phox2bO35690 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.65■□□□□ 0.58
Phox2bO35690 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Gm2399-201ENSMUST00000104944 225 ntBASIC18.65■□□□□ 0.58
Phox2bO35690 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Phox2bO35690 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.65■□□□□ 0.58
Phox2bO35690 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Phox2bO35690 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Phox2bO35690 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.64■□□□□ 0.57
Phox2bO35690 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.64■□□□□ 0.57
Phox2bO35690 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.64■□□□□ 0.57
Phox2bO35690 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Phox2bO35690 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Phox2bO35690 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Phox2bO35690 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms