Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1O35604 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Npc1O35604 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1O35604 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1O35604 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Npc1O35604 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Npc1O35604 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.17■□□□□ 0.5
Npc1O35604 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1O35604 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Npc1O35604 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1O35604 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1O35604 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1O35604 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.16■□□□□ 0.5
Npc1O35604 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Npc1O35604 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Npc1O35604 Gm6420-201ENSMUST00000193885 723 ntBASIC18.16■□□□□ 0.5
Npc1O35604 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Npc1O35604 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1O35604 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Npc1O35604 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Gm29257-201ENSMUST00000186115 639 ntBASIC18.15■□□□□ 0.5
Npc1O35604 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.15■□□□□ 0.5
Npc1O35604 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.15■□□□□ 0.5
Npc1O35604 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Npc1O35604 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Npc1O35604 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Npc1O35604 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Npc1O35604 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Npc1O35604 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Npc1O35604 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1O35604 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Npc1O35604 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1O35604 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1O35604 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Npc1O35604 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1O35604 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Npc1O35604 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Npc1O35604 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.14■□□□□ 0.49
Npc1O35604 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.14■□□□□ 0.49
Npc1O35604 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Npc1O35604 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1O35604 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Npc1O35604 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1O35604 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1O35604 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.13■□□□□ 0.49
Npc1O35604 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1O35604 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1O35604 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1O35604 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1O35604 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1O35604 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1O35604 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1O35604 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Npc1O35604 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Npc1O35604 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1O35604 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1O35604 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Npc1O35604 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.12■□□□□ 0.49
Npc1O35604 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Npc1O35604 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1O35604 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Npc1O35604 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Npc1O35604 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1O35604 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1O35604 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.12■□□□□ 0.49
Npc1O35604 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.12■□□□□ 0.49
Npc1O35604 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1O35604 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1O35604 Gm6365-201ENSMUST00000054711 744 ntBASIC18.12■□□□□ 0.49
Npc1O35604 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Npc1O35604 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1O35604 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.12■□□□□ 0.49
Npc1O35604 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1O35604 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms