Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.65■□□□□ 0.74
Clcn6O35454 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.65■□□□□ 0.74
Clcn6O35454 Gm29107-201ENSMUST00000190910 347 ntBASIC19.65■□□□□ 0.74
Clcn6O35454 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clcn6O35454 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.65■□□□□ 0.74
Clcn6O35454 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clcn6O35454 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clcn6O35454 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn6O35454 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.64■□□□□ 0.73
Clcn6O35454 Gm37436-201ENSMUST00000193842 1085 ntBASIC19.64■□□□□ 0.73
Clcn6O35454 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.64■□□□□ 0.73
Clcn6O35454 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Clcn6O35454 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.64■□□□□ 0.73
Clcn6O35454 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn6O35454 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn6O35454 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn6O35454 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn6O35454 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn6O35454 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn6O35454 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Clcn6O35454 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn6O35454 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn6O35454 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn6O35454 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn6O35454 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.63■□□□□ 0.73
Clcn6O35454 Gm43137-201ENSMUST00000198052 594 ntBASIC19.63■□□□□ 0.73
Clcn6O35454 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Clcn6O35454 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn6O35454 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn6O35454 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn6O35454 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Clcn6O35454 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Clcn6O35454 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Clcn6O35454 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC19.62■□□□□ 0.73
Clcn6O35454 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn6O35454 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.62■□□□□ 0.73
Clcn6O35454 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn6O35454 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Clcn6O35454 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn6O35454 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Clcn6O35454 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Clcn6O35454 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn6O35454 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn6O35454 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn6O35454 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn6O35454 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn6O35454 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Clcn6O35454 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn6O35454 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn6O35454 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn6O35454 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.6■□□□□ 0.73
Clcn6O35454 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Clcn6O35454 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.6■□□□□ 0.73
Clcn6O35454 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn6O35454 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.59■□□□□ 0.73
Clcn6O35454 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.59■□□□□ 0.73
Clcn6O35454 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Clcn6O35454 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Clcn6O35454 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC19.59■□□□□ 0.73
Clcn6O35454 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Clcn6O35454 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn6O35454 AC154616.1-201ENSMUST00000226995 804 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms