Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf2O35218 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
Cpsf2O35218 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Cpsf2O35218 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.91■□□□□ 0.78
Cpsf2O35218 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.91■□□□□ 0.78
Cpsf2O35218 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cpsf2O35218 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cpsf2O35218 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Cpsf2O35218 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
Cpsf2O35218 Gm45417-201ENSMUST00000209533 758 ntBASIC19.9■□□□□ 0.78
Cpsf2O35218 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cpsf2O35218 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.9■□□□□ 0.78
Cpsf2O35218 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf2O35218 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cpsf2O35218 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf2O35218 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cpsf2O35218 Gm40848-201ENSMUST00000221998 324 ntBASIC19.89■□□□□ 0.77
Cpsf2O35218 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf2O35218 Gm6139-201ENSMUST00000079261 882 ntBASIC19.89■□□□□ 0.77
Cpsf2O35218 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cpsf2O35218 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf2O35218 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf2O35218 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf2O35218 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cpsf2O35218 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf2O35218 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf2O35218 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf2O35218 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Cpsf2O35218 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cpsf2O35218 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf2O35218 Gm27801-201ENSMUST00000184174 223 ntBASIC19.88■□□□□ 0.77
Cpsf2O35218 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf2O35218 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Cpsf2O35218 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.88■□□□□ 0.77
Cpsf2O35218 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf2O35218 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cpsf2O35218 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf2O35218 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cpsf2O35218 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cpsf2O35218 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.87■□□□□ 0.77
Cpsf2O35218 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cpsf2O35218 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cpsf2O35218 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf2O35218 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Cpsf2O35218 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf2O35218 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf2O35218 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf2O35218 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf2O35218 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf2O35218 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf2O35218 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cpsf2O35218 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf2O35218 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf2O35218 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf2O35218 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf2O35218 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf2O35218 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf2O35218 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.86■□□□□ 0.77
Cpsf2O35218 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf2O35218 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf2O35218 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf2O35218 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.85■□□□□ 0.77
Cpsf2O35218 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf2O35218 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf2O35218 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf2O35218 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf2O35218 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf2O35218 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf2O35218 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cpsf2O35218 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf2O35218 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf2O35218 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.84■□□□□ 0.77
Cpsf2O35218 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf2O35218 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf2O35218 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cpsf2O35218 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf2O35218 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms