Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
AlyrefO08583 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AlyrefO08583 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.83■□□□□ 0.6
AlyrefO08583 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
AlyrefO08583 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.82■□□□□ 0.6
AlyrefO08583 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
AlyrefO08583 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.82■□□□□ 0.6
AlyrefO08583 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
AlyrefO08583 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.82■□□□□ 0.6
AlyrefO08583 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AlyrefO08583 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AlyrefO08583 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AlyrefO08583 Gm7889-201ENSMUST00000185591 958 ntBASIC18.81■□□□□ 0.6
AlyrefO08583 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.81■□□□□ 0.6
AlyrefO08583 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AlyrefO08583 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AlyrefO08583 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AlyrefO08583 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.81■□□□□ 0.6
AlyrefO08583 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AlyrefO08583 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AlyrefO08583 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AlyrefO08583 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AlyrefO08583 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
AlyrefO08583 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AlyrefO08583 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AlyrefO08583 Mir6236-201ENSMUST00000184437 123 ntBASIC18.8■□□□□ 0.6
AlyrefO08583 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AlyrefO08583 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AlyrefO08583 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AlyrefO08583 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AlyrefO08583 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AlyrefO08583 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AlyrefO08583 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AlyrefO08583 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AlyrefO08583 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
AlyrefO08583 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
AlyrefO08583 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.79■□□□□ 0.6
AlyrefO08583 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AlyrefO08583 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AlyrefO08583 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AlyrefO08583 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AlyrefO08583 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AlyrefO08583 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AlyrefO08583 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AlyrefO08583 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AlyrefO08583 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AlyrefO08583 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
AlyrefO08583 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
AlyrefO08583 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AlyrefO08583 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.78■□□□□ 0.6
AlyrefO08583 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.78■□□□□ 0.6
AlyrefO08583 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
AlyrefO08583 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.78■□□□□ 0.6
AlyrefO08583 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.78■□□□□ 0.6
AlyrefO08583 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AlyrefO08583 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AlyrefO08583 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.78■□□□□ 0.6
AlyrefO08583 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AlyrefO08583 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AlyrefO08583 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.77■□□□□ 0.6
AlyrefO08583 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AlyrefO08583 Gm2399-201ENSMUST00000104944 225 ntBASIC18.77■□□□□ 0.6
AlyrefO08583 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
AlyrefO08583 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AlyrefO08583 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.77■□□□□ 0.6
AlyrefO08583 Gm11539-201ENSMUST00000119837 557 ntBASIC18.77■□□□□ 0.6
AlyrefO08583 Gm13436-201ENSMUST00000120418 567 ntBASIC18.77■□□□□ 0.6
AlyrefO08583 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.77■□□□□ 0.6
AlyrefO08583 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AlyrefO08583 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AlyrefO08583 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.77■□□□□ 0.6
AlyrefO08583 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
AlyrefO08583 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
AlyrefO08583 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
AlyrefO08583 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AlyrefO08583 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AlyrefO08583 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.76■□□□□ 0.59
AlyrefO08583 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AlyrefO08583 Gm13158-201ENSMUST00000122007 736 ntBASIC18.76■□□□□ 0.59
AlyrefO08583 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
AlyrefO08583 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AlyrefO08583 Gm6443-201ENSMUST00000203599 874 ntBASIC18.76■□□□□ 0.59
AlyrefO08583 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.76■□□□□ 0.59
AlyrefO08583 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AlyrefO08583 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms