Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh11xF6ZNL5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdh11xF6ZNL5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh11xF6ZNL5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Gm13534-201ENSMUST00000121169 513 ntBASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 AV356131-201ENSMUST00000206201 750 ntBASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh11xF6ZNL5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdh11xF6ZNL5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh11xF6ZNL5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh11xF6ZNL5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh11xF6ZNL5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh11xF6ZNL5 Gm13234-201ENSMUST00000120010 747 ntBASIC20.67■□□□□ 0.9
Pcdh11xF6ZNL5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh11xF6ZNL5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh11xF6ZNL5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdh11xF6ZNL5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcdh11xF6ZNL5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh11xF6ZNL5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh11xF6ZNL5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh11xF6ZNL5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh11xF6ZNL5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdh11xF6ZNL5 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.66■□□□□ 0.9
Pcdh11xF6ZNL5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh11xF6ZNL5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh11xF6ZNL5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh11xF6ZNL5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.65■□□□□ 0.9
Pcdh11xF6ZNL5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh11xF6ZNL5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Pcdh11xF6ZNL5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh11xF6ZNL5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Gm37179-201ENSMUST00000194862 823 ntBASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh11xF6ZNL5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms