Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cntnap3E9PY62 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cntnap3E9PY62 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cntnap3E9PY62 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Gm18959-201ENSMUST00000208954 655 ntBASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Gm18032-201ENSMUST00000222541 538 ntBASIC20.6■□□□□ 0.89
Cntnap3E9PY62 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cntnap3E9PY62 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cntnap3E9PY62 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cntnap3E9PY62 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.59■□□□□ 0.89
Cntnap3E9PY62 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cntnap3E9PY62 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Cntnap3E9PY62 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Cntnap3E9PY62 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cntnap3E9PY62 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cntnap3E9PY62 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Odf3b-204ENSMUST00000227834 930 ntBASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cntnap3E9PY62 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cntnap3E9PY62 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cntnap3E9PY62 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cntnap3E9PY62 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cntnap3E9PY62 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cntnap3E9PY62 AA386476-201ENSMUST00000098781 1665 ntBASIC20.58■□□□□ 0.88
Cntnap3E9PY62 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cntnap3E9PY62 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cntnap3E9PY62 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cntnap3E9PY62 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cntnap3E9PY62 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.57■□□□□ 0.88
Cntnap3E9PY62 Gm11927-201ENSMUST00000118472 759 ntBASIC20.57■□□□□ 0.88
Cntnap3E9PY62 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.57■□□□□ 0.88
Cntnap3E9PY62 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.57■□□□□ 0.88
Cntnap3E9PY62 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cntnap3E9PY62 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cntnap3E9PY62 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
Cntnap3E9PY62 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cntnap3E9PY62 Gm12382-201ENSMUST00000122005 922 ntBASIC20.56■□□□□ 0.88
Cntnap3E9PY62 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cntnap3E9PY62 Gm3375-201ENSMUST00000203929 796 ntBASIC20.56■□□□□ 0.88
Cntnap3E9PY62 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cntnap3E9PY62 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cntnap3E9PY62 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cntnap3E9PY62 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cntnap3E9PY62 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cntnap3E9PY62 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Gm7284-201ENSMUST00000131667 944 ntBASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntnap3E9PY62 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.54■□□□□ 0.88
Cntnap3E9PY62 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cntnap3E9PY62 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cntnap3E9PY62 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cntnap3E9PY62 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cntnap3E9PY62 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cntnap3E9PY62 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.53■□□□□ 0.88
Cntnap3E9PY62 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cntnap3E9PY62 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms