Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc112A0AUP1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Gm27454-201ENSMUST00000185090 204 ntBASIC21.32■■□□□ 1
Ccdc112A0AUP1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc112A0AUP1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Gm6139-201ENSMUST00000079261 882 ntBASIC21.31■■□□□ 1
Ccdc112A0AUP1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc112A0AUP1 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.31■■□□□ 1
Ccdc112A0AUP1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.3■■□□□ 1
Ccdc112A0AUP1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc112A0AUP1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.3■■□□□ 1
Ccdc112A0AUP1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc112A0AUP1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc112A0AUP1 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.3■■□□□ 1
Ccdc112A0AUP1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc112A0AUP1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc112A0AUP1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc112A0AUP1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc112A0AUP1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc112A0AUP1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ccdc112A0AUP1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc112A0AUP1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc112A0AUP1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc112A0AUP1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc112A0AUP1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc112A0AUP1 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.28■■□□□ 1
Ccdc112A0AUP1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.28■■□□□ 1
Ccdc112A0AUP1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc112A0AUP1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc112A0AUP1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.28■■□□□ 1
Ccdc112A0AUP1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc112A0AUP1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc112A0AUP1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.27■■□□□ 1
Ccdc112A0AUP1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.27■■□□□ 1
Ccdc112A0AUP1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ccdc112A0AUP1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc112A0AUP1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc112A0AUP1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc112A0AUP1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Gm26833-201ENSMUST00000180899 440 ntBASIC21.25■□□□□ 0.99
Ccdc112A0AUP1 Gm40848-201ENSMUST00000221998 324 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms