Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Gm15039-201ENSMUST00000118914 875 ntBASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv17A0A140T8P8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv17A0A140T8P8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv17A0A140T8P8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv17A0A140T8P8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv17A0A140T8P8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv17A0A140T8P8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trbv17A0A140T8P8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv17A0A140T8P8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv17A0A140T8P8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv17A0A140T8P8 Gm42778-201ENSMUST00000199644 553 ntBASIC14.27□□□□□ -0.13
Trbv17A0A140T8P8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv17A0A140T8P8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv17A0A140T8P8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv17A0A140T8P8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Trbv17A0A140T8P8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv17A0A140T8P8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv17A0A140T8P8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv17A0A140T8P8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv17A0A140T8P8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv17A0A140T8P8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trbv17A0A140T8P8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv17A0A140T8P8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trbv17A0A140T8P8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms