Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Gm7860-201ENSMUST00000121190 879 ntBASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Gm9847-201ENSMUST00000052528 599 ntBASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trbv29A0A0G2LB96 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv29A0A0G2LB96 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Gm12251-201ENSMUST00000117893 792 ntBASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trbv29A0A0G2LB96 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.47■□□□□ 0.07
Trbv29A0A0G2LB96 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv29A0A0G2LB96 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv29A0A0G2LB96 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Trbv29A0A0G2LB96 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.46■□□□□ 0.06
Trbv29A0A0G2LB96 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv29A0A0G2LB96 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms