Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Golgb1-201ENSMUST00000023534 498 ntBASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.66■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.64■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Sirpb1aA0A0A6YYP6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.64■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.64■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.63■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.63■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sirpb1aA0A0A6YYP6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms