Protein–RNA interactions for Protein: A0A087WR25

Gm28360, Predicted gene 28360, mousemouse

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28360A0A087WR25 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm28360A0A087WR25 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm28360A0A087WR25 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm28360A0A087WR25 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Gm27502-201ENSMUST00000183495 199 ntBASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28360A0A087WR25 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28360A0A087WR25 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Gm28360A0A087WR25 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28360A0A087WR25 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28360A0A087WR25 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28360A0A087WR25 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28360A0A087WR25 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28360A0A087WR25 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.48■□□□□ 0.55
Gm28360A0A087WR25 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.48■□□□□ 0.55
Gm28360A0A087WR25 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28360A0A087WR25 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Gm28360A0A087WR25 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28360A0A087WR25 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28360A0A087WR25 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28360A0A087WR25 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28360A0A087WR25 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28360A0A087WR25 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28360A0A087WR25 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.47■□□□□ 0.55
Gm28360A0A087WR25 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28360A0A087WR25 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28360A0A087WR25 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Gm28360A0A087WR25 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28360A0A087WR25 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28360A0A087WR25 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28360A0A087WR25 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28360A0A087WR25 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms