Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8n-2A0A075B633 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav8n-2A0A075B633 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.14■□□□□ 0.33
Trav8n-2A0A075B633 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Gm15565-201ENSMUST00000118890 427 ntBASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav8n-2A0A075B633 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8n-2A0A075B633 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8n-2A0A075B633 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8n-2A0A075B633 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8n-2A0A075B633 Gm11643-201ENSMUST00000119578 864 ntBASIC17.1■□□□□ 0.33
Trav8n-2A0A075B633 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.1■□□□□ 0.33
Trav8n-2A0A075B633 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8n-2A0A075B633 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.1■□□□□ 0.33
Trav8n-2A0A075B633 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8n-2A0A075B633 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8n-2A0A075B633 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8n-2A0A075B633 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.08■□□□□ 0.33
Trav8n-2A0A075B633 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav8n-2A0A075B633 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms