Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Gm3142-201ENSMUST00000190107 414 ntBASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Gm43247-201ENSMUST00000198638 481 ntBASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 AC152946.3-201ENSMUST00000219424 280 ntBASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Gm7727-201ENSMUST00000219830 671 ntBASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Gm5721-201ENSMUST00000119845 1696 ntBASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 CT009711.1-201ENSMUST00000223992 3040 ntBASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cchcr1Q8K2I2 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm42899-201ENSMUST00000197034 2667 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm28497-201ENSMUST00000189646 3029 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm23706-201ENSMUST00000104369 82 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm20452-201ENSMUST00000174686 513 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm7734-201ENSMUST00000182832 1011 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm29041-201ENSMUST00000189199 380 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm45795-201ENSMUST00000211847 400 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 AC132384.1-201ENSMUST00000219908 1195 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 AC100209.1-201ENSMUST00000225562 409 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 AC147096.1-201ENSMUST00000227648 352 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 AC142114.1-201ENSMUST00000227724 328 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 AC166822.2-201ENSMUST00000228746 275 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm5514-201ENSMUST00000060477 306 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm13821-201ENSMUST00000202029 3201 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm45182-201ENSMUST00000207579 2404 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 Gm38386-201ENSMUST00000194293 3421 ntBASIC9.3□□□□□ -0.92
Cchcr1Q8K2I2 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm37151-201ENSMUST00000194631 5007 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm23946-201ENSMUST00000104423 197 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm22900-201ENSMUST00000104538 130 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 n-R5s76-201ENSMUST00000122700 113 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm6689-201ENSMUST00000130905 481 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Aamdc-214ENSMUST00000178078 723 ntTSL 2 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm32102-201ENSMUST00000196885 241 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm6394-201ENSMUST00000197077 477 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 AC119987.1-201ENSMUST00000212316 848 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm24696-201ENSMUST00000083878 134 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm8428-201ENSMUST00000159919 1784 ntBASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cchcr1Q8K2I2 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 519.1 ms