Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Zmym1-201ENSMUST00000055013 3001 ntAPPRIS P2 TSL 2 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm42972-201ENSMUST00000196937 5617 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Prkaa1-202ENSMUST00000228218 4618 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 AC170188.1-201ENSMUST00000223710 1963 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm22934-201ENSMUST00000103961 132 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm13573-201ENSMUST00000116410 631 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm7091-201ENSMUST00000116438 586 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm11443-201ENSMUST00000118790 479 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm9378-201ENSMUST00000120315 471 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm16057-201ENSMUST00000120811 759 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm14414-201ENSMUST00000120833 573 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm18988-201ENSMUST00000205601 746 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm6909-201ENSMUST00000209825 989 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 AC151982.1-201ENSMUST00000223546 464 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 AC131586.4-201ENSMUST00000228424 668 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 AC122877.1-201ENSMUST00000228873 218 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm5619-201ENSMUST00000071172 760 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm6807-201ENSMUST00000077435 888 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Mir24-2-201ENSMUST00000083607 107 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Gm10029-201ENSMUST00000089635 330 ntBASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup88Q8CEC0 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Nup88Q8CEC0 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Nup88Q8CEC0 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC9.34□□□□□ -0.92
Nup88Q8CEC0 AC122426.1-201ENSMUST00000214736 2235 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm13466-201ENSMUST00000121515 999 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm25266-201ENSMUST00000158521 304 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm24347-201ENSMUST00000158711 142 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm8407-201ENSMUST00000192719 427 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm9729-201ENSMUST00000196364 265 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm6522-201ENSMUST00000197160 1203 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 AC132304.1-201ENSMUST00000218860 135 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 CT009515.2-201ENSMUST00000226126 736 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm6054-201ENSMUST00000078052 378 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm6418-201ENSMUST00000118325 3577 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm43544-201ENSMUST00000196474 2472 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm43766-201ENSMUST00000200590 5417 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm7134-201ENSMUST00000122296 2406 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Gm12378-201ENSMUST00000116171 1461 ntBASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nup88Q8CEC0 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm36952-201ENSMUST00000194923 3625 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Trim39-205ENSMUST00000173369 2914 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms