Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm24039-201ENSMUST00000157878 132 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm22202-201ENSMUST00000158608 311 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm7211-201ENSMUST00000172692 1118 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm37822-201ENSMUST00000192618 1109 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm38247-201ENSMUST00000194675 433 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 AC155259.1-201ENSMUST00000214794 477 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 AC158686.1-201ENSMUST00000218068 2332 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm22927-201ENSMUST00000104268 131 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm22900-201ENSMUST00000104538 130 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm23840-201ENSMUST00000116950 97 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm24083-201ENSMUST00000175174 120 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm25190-201ENSMUST00000176664 95 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm27435-201ENSMUST00000183588 88 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm8510-201ENSMUST00000189202 895 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm17909-201ENSMUST00000207587 907 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 AC152946.3-201ENSMUST00000219424 280 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 CT571271.1-201ENSMUST00000227071 670 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Gm12378-201ENSMUST00000116171 1461 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ccdc38Q8CDN8 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm25761-201ENSMUST00000103983 128 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm25442-201ENSMUST00000177270 92 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm7850-201ENSMUST00000212909 712 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm18362-201ENSMUST00000221786 529 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm21957-201ENSMUST00000073056 438 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms