Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccdc60Q8C4J0 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccdc60Q8C4J0 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccdc60Q8C4J0 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccdc60Q8C4J0 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccdc60Q8C4J0 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm4451-201ENSMUST00000186000 1891 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm7785-201ENSMUST00000117121 892 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm12611-201ENSMUST00000119452 1037 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm8974-201ENSMUST00000175770 479 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm25082-201ENSMUST00000177296 255 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm26269-201ENSMUST00000180144 126 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm17867-201ENSMUST00000188981 391 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 AC165349.2-201ENSMUST00000219097 426 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 AC124715.2-201ENSMUST00000226762 617 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 AC130219.1-201ENSMUST00000228406 3433 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Gm37326-201ENSMUST00000192828 3071 ntBASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccdc60Q8C4J0 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm7647-201ENSMUST00000200996 1389 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm37968-201ENSMUST00000195131 3201 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm11907-201ENSMUST00000118918 1007 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Fau-ps2-201ENSMUST00000119333 371 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm12361-201ENSMUST00000119806 1044 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm26407-201ENSMUST00000158504 307 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm36996-201ENSMUST00000194466 250 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm45299-201ENSMUST00000210199 420 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 AC163667.2-201ENSMUST00000223769 791 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm24696-201ENSMUST00000083878 134 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm37873-201ENSMUST00000194571 2280 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Gm43621-201ENSMUST00000202733 2022 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 AC154355.1-201ENSMUST00000224604 2162 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 AC158686.1-201ENSMUST00000218068 2332 ntBASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ccdc60Q8C4J0 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm43430-201ENSMUST00000196513 3897 ntBASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm8084-201ENSMUST00000120807 752 ntBASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm13649-201ENSMUST00000122325 606 ntBASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm25845-201ENSMUST00000122588 310 ntBASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm22224-201ENSMUST00000157357 93 ntBASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm37185-201ENSMUST00000193852 410 ntBASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccdc60Q8C4J0 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms