Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc88cQ6VGS5 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC8.74□□□□□ -1.01
Ccdc88cQ6VGS5 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc88cQ6VGS5 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc88cQ6VGS5 AC138284.3-201ENSMUST00000217345 4663 ntBASIC8.74□□□□□ -1.01
Ccdc88cQ6VGS5 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Ccdc88cQ6VGS5 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm24373-201ENSMUST00000104393 132 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm15778-201ENSMUST00000118469 608 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm43846-201ENSMUST00000200502 932 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm8728-201ENSMUST00000207367 2178 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm8486-201ENSMUST00000207508 2171 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm8685-201ENSMUST00000207567 2183 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm16443-201ENSMUST00000207909 2184 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm12773-201ENSMUST00000120134 587 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm24130-201ENSMUST00000158536 151 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm5698-201ENSMUST00000178317 724 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm5973-201ENSMUST00000178542 496 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm28266-201ENSMUST00000191410 439 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm44245-201ENSMUST00000204304 232 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 AC061963.2-201ENSMUST00000213541 2739 ntBASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc88cQ6VGS5 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm15576-201ENSMUST00000117806 583 ntBASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm18033-201ENSMUST00000186678 550 ntBASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm37481-201ENSMUST00000195176 403 ntBASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm4259-201ENSMUST00000206489 758 ntBASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 AC131586.4-201ENSMUST00000228424 668 ntBASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm8107-201ENSMUST00000117477 2009 ntBASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc88cQ6VGS5 Gm16433-201ENSMUST00000062429 1984 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms