Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm43792-201ENSMUST00000202492 2210 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm11443-201ENSMUST00000118790 479 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm15572-201ENSMUST00000119248 593 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm12361-201ENSMUST00000119806 1044 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm9378-201ENSMUST00000120315 471 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm26736-201ENSMUST00000180425 1236 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm4891-201ENSMUST00000182279 912 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm27435-201ENSMUST00000183588 88 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm38164-201ENSMUST00000192810 330 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm23604-202ENSMUST00000198428 137 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm9689-201ENSMUST00000210009 428 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 AC154738.3-201ENSMUST00000227953 409 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm43411-201ENSMUST00000196235 1579 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm42899-201ENSMUST00000197034 2667 ntBASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc2Q6PDG5 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm23131-201ENSMUST00000104253 132 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm12075-201ENSMUST00000117426 397 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm10651-201ENSMUST00000118212 609 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm13333-201ENSMUST00000119424 781 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm11901-201ENSMUST00000120412 437 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm15989-201ENSMUST00000121895 498 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm24083-201ENSMUST00000175174 120 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Mir6415-201ENSMUST00000184064 100 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm18970-201ENSMUST00000186040 938 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm28193-201ENSMUST00000189863 615 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm42959-201ENSMUST00000202184 212 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm18060-201ENSMUST00000207407 564 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 AC116487.1-201ENSMUST00000227033 339 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 AC106830.1-201ENSMUST00000228032 1003 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm10029-201ENSMUST00000089635 330 ntBASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smarcc2Q6PDG5 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 AC120163.1-201ENSMUST00000228618 1680 ntBASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 AC105958.1-201ENSMUST00000214783 2144 ntBASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Gm43618-201ENSMUST00000197392 3451 ntBASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Gm38339-201ENSMUST00000195479 1829 ntBASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Gm12098-201ENSMUST00000118277 508 ntBASIC9.29□□□□□ -0.92
Smarcc2Q6PDG5 Gm12072-201ENSMUST00000118293 715 ntBASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms