Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 AC166159.1-201ENSMUST00000227154 1380 ntBASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gm37978-201ENSMUST00000194736 2915 ntBASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm12851-201ENSMUST00000117920 421 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 BC002163-201ENSMUST00000121906 319 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm24050-201ENSMUST00000158623 290 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm4781-201ENSMUST00000167995 781 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm7393-201ENSMUST00000172650 739 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm18033-201ENSMUST00000186678 550 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm29195-201ENSMUST00000189038 379 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm19254-201ENSMUST00000204828 294 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm11149-202ENSMUST00000215070 1169 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 AC122360.1-201ENSMUST00000217737 624 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm4120-201ENSMUST00000220456 578 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Vps54Q5SPW0 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 AC154355.1-201ENSMUST00000224604 2162 ntBASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 AC122881.1-201ENSMUST00000225757 2695 ntBASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps54Q5SPW0 Gm38147-201ENSMUST00000192397 1798 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm4919-201ENSMUST00000117825 604 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm11969-201ENSMUST00000118848 356 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm14016-201ENSMUST00000119095 486 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm9392-201ENSMUST00000119337 554 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm15049-201ENSMUST00000120474 463 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm11809-201ENSMUST00000120923 950 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Mir1962-201ENSMUST00000157516 121 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm2951-201ENSMUST00000169447 490 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm6100-201ENSMUST00000180253 403 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm5541-201ENSMUST00000193248 1113 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 AC153561.1-201ENSMUST00000215943 469 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 AC162176.1-201ENSMUST00000216490 618 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 CT009733.1-202ENSMUST00000224941 441 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 AC154760.1-201ENSMUST00000227218 673 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm24696-201ENSMUST00000083878 134 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms