Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Hmgb1P63158 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Hmgb1P63158 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Hmgb1P63158 Gm25803-201ENSMUST00000104419 131 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Gm13750-201ENSMUST00000117621 465 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Gm14682-201ENSMUST00000117977 524 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Mup-ps24-201ENSMUST00000119939 286 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Gm15481-201ENSMUST00000120264 539 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Gm4773-201ENSMUST00000120392 702 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Gm11662-201ENSMUST00000121389 1193 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Gm25843-201ENSMUST00000122582 314 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC9□□□□□ -0.97
Hmgb1P63158 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC9□□□□□ -0.97
Hmgb1P63158 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC9□□□□□ -0.97
Hmgb1P63158 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC9□□□□□ -0.97
Hmgb1P63158 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC9□□□□□ -0.97
Hmgb1P63158 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC9□□□□□ -0.97
Hmgb1P63158 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC9□□□□□ -0.97
Hmgb1P63158 Gm44658-201ENSMUST00000207965 637 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC9□□□□□ -0.97
Hmgb1P63158 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC9□□□□□ -0.97
Hmgb1P63158 AC132304.1-201ENSMUST00000218860 135 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 AC159205.1-201ENSMUST00000225513 1099 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Cenpx-202ENSMUST00000055424 606 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 n-R5s74-201ENSMUST00000082654 116 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Bcl2a1d-201ENSMUST00000098486 863 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Gm37945-201ENSMUST00000192536 4367 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Prnd-204ENSMUST00000110172 3176 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC9□□□□□ -0.97
Hmgb1P63158 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC9□□□□□ -0.97
Hmgb1P63158 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC9□□□□□ -0.97
Hmgb1P63158 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Gm36930-201ENSMUST00000195431 2376 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC9□□□□□ -0.97
Hmgb1P63158 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
Hmgb1P63158 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Hmgb1P63158 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC8.99□□□□□ -0.97
Hmgb1P63158 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Hmgb1P63158 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Hmgb1P63158 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm24542-201ENSMUST00000103870 110 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm25095-201ENSMUST00000104047 131 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm15464-201ENSMUST00000118718 431 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm14034-201ENSMUST00000120147 551 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 4930562A09Rik-201ENSMUST00000153818 734 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm22649-201ENSMUST00000175134 298 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 AF067061-202ENSMUST00000181748 881 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Mir8097-201ENSMUST00000185150 119 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC8.99□□□□□ -0.97
Hmgb1P63158 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm29453-201ENSMUST00000186428 1279 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Ighv1-33-201ENSMUST00000193220 350 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm43044-201ENSMUST00000198091 379 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm5981-201ENSMUST00000199912 487 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm5723-201ENSMUST00000203096 432 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm6375-201ENSMUST00000205201 1145 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm39121-201ENSMUST00000208847 525 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Gm45549-201ENSMUST00000210180 975 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC8.99□□□□□ -0.97
Hmgb1P63158 AC110236.1-201ENSMUST00000227807 527 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb1P63158 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Hmgb1P63158 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Hmgb1P63158 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
Hmgb1P63158 Snora74a-201ENSMUST00000083715 196 ntBASIC8.99□□□□□ -0.97
Hmgb1P63158 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms