Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC8.03□□□□□ -1.12
RxraP28700 Gm5857-201ENSMUST00000198953 493 ntBASIC8.03□□□□□ -1.12
RxraP28700 Gm8686-201ENSMUST00000203028 388 ntBASIC8.03□□□□□ -1.12
RxraP28700 Gm7850-201ENSMUST00000212909 712 ntBASIC8.03□□□□□ -1.12
RxraP28700 AC154249.1-201ENSMUST00000226296 320 ntBASIC8.03□□□□□ -1.12
RxraP28700 AC124103.1-201ENSMUST00000227564 1027 ntBASIC8.03□□□□□ -1.12
RxraP28700 Tssk4-206ENSMUST00000228041 1217 ntBASIC8.03□□□□□ -1.12
RxraP28700 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Gm5614-201ENSMUST00000091097 318 ntBASIC8.03□□□□□ -1.12
RxraP28700 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC8.03□□□□□ -1.12
RxraP28700 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RxraP28700 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.03□□□□□ -1.12
RxraP28700 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
RxraP28700 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RxraP28700 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
RxraP28700 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
RxraP28700 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
RxraP28700 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.02□□□□□ -1.13
RxraP28700 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Gm12583-201ENSMUST00000120677 853 ntBASIC8.02□□□□□ -1.13
RxraP28700 Gm13466-201ENSMUST00000121515 999 ntBASIC8.02□□□□□ -1.13
RxraP28700 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC8.02□□□□□ -1.13
RxraP28700 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Gm20396-201ENSMUST00000173358 745 ntBASIC8.02□□□□□ -1.13
RxraP28700 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
RxraP28700 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC8.02□□□□□ -1.13
RxraP28700 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC8.02□□□□□ -1.13
RxraP28700 Gm28645-201ENSMUST00000185859 564 ntBASIC8.02□□□□□ -1.13
RxraP28700 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC8.02□□□□□ -1.13
RxraP28700 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC8.02□□□□□ -1.13
RxraP28700 Gm3011-201ENSMUST00000215669 582 ntBASIC8.02□□□□□ -1.13
RxraP28700 Gm46313-201ENSMUST00000220463 547 ntBASIC8.02□□□□□ -1.13
RxraP28700 Gm21941-201ENSMUST00000221121 562 ntBASIC8.02□□□□□ -1.13
RxraP28700 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC8.02□□□□□ -1.13
RxraP28700 AC134917.3-201ENSMUST00000222057 1283 ntBASIC8.02□□□□□ -1.13
RxraP28700 Gm18030-201ENSMUST00000222163 731 ntBASIC8.02□□□□□ -1.13
RxraP28700 AC129975.2-201ENSMUST00000223705 775 ntBASIC8.02□□□□□ -1.13
RxraP28700 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
RxraP28700 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
RxraP28700 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
RxraP28700 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
RxraP28700 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
RxraP28700 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
RxraP28700 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
RxraP28700 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RxraP28700 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
RxraP28700 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
RxraP28700 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.01□□□□□ -1.13
RxraP28700 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
RxraP28700 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
RxraP28700 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
RxraP28700 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
RxraP28700 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
RxraP28700 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RxraP28700 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
RxraP28700 Gm25761-201ENSMUST00000103983 128 ntBASIC8.01□□□□□ -1.13
RxraP28700 Gm11348-201ENSMUST00000118813 318 ntBASIC8.01□□□□□ -1.13
RxraP28700 Gm6921-201ENSMUST00000161478 435 ntBASIC8.01□□□□□ -1.13
RxraP28700 Gm21139-201ENSMUST00000186594 877 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms