Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Gm12883-201ENSMUST00000117867 364 ntBASIC7.05□□□□□ -1.28
P20040 Gm12180-201ENSMUST00000120905 661 ntBASIC7.05□□□□□ -1.28
P20040 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC7.05□□□□□ -1.28
P20040 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC7.05□□□□□ -1.28
P20040 Phf11d-202ENSMUST00000160425 1281 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
P20040 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC7.05□□□□□ -1.28
P20040 Gm4252-201ENSMUST00000174823 313 ntBASIC7.05□□□□□ -1.28
P20040 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
P20040 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC7.05□□□□□ -1.28
P20040 Gm8686-201ENSMUST00000203028 388 ntBASIC7.05□□□□□ -1.28
P20040 Gm6579-201ENSMUST00000208224 865 ntBASIC7.05□□□□□ -1.28
P20040 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC7.05□□□□□ -1.28
P20040 AC192334.3-201ENSMUST00000221828 569 ntTSL 5 BASIC7.05□□□□□ -1.28
P20040 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
P20040 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC7.05□□□□□ -1.28
P20040 Fabp5l2-201ENSMUST00000072582 408 ntBASIC7.05□□□□□ -1.28
P20040 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
P20040 Gm16026-201ENSMUST00000094774 580 ntBASIC7.05□□□□□ -1.28
P20040 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
P20040 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
P20040 Gm45292-201ENSMUST00000211232 2207 ntBASIC7.05□□□□□ -1.28
P20040 AC122426.1-201ENSMUST00000214736 2235 ntBASIC7.05□□□□□ -1.28
P20040 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 AC153862.1-201ENSMUST00000215700 3349 ntBASIC7.05□□□□□ -1.28
P20040 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Gm37893-201ENSMUST00000192826 2437 ntBASIC7.05□□□□□ -1.28
P20040 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
P20040 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
P20040 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
P20040 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
P20040 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
P20040 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
P20040 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC7.04□□□□□ -1.28
P20040 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
P20040 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
P20040 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
P20040 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Gm13160-201ENSMUST00000118441 627 ntBASIC7.04□□□□□ -1.28
P20040 Gm6275-201ENSMUST00000118971 1122 ntBASIC7.04□□□□□ -1.28
P20040 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC7.04□□□□□ -1.28
P20040 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC7.04□□□□□ -1.28
P20040 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC7.04□□□□□ -1.28
P20040 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Gm22949-201ENSMUST00000158562 105 ntBASIC7.04□□□□□ -1.28
P20040 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
P20040 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC7.04□□□□□ -1.28
P20040 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC7.04□□□□□ -1.28
P20040 Pisrt1-201ENSMUST00000195532 515 ntBASIC7.04□□□□□ -1.28
P20040 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.04□□□□□ -1.28
P20040 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC7.04□□□□□ -1.28
P20040 Gm45475-201ENSMUST00000209381 309 ntBASIC7.04□□□□□ -1.28
P20040 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC7.04□□□□□ -1.28
P20040 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC7.04□□□□□ -1.28
P20040 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC7.04□□□□□ -1.28
P20040 Gm32089-201ENSMUST00000221222 1193 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 AC131745.3-201ENSMUST00000223582 554 ntBASIC7.04□□□□□ -1.28
P20040 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
P20040 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
P20040 Gm37403-201ENSMUST00000193775 3521 ntBASIC7.04□□□□□ -1.28
P20040 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
P20040 Gm37258-201ENSMUST00000191734 1627 ntBASIC7.04□□□□□ -1.28
P20040 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Zfp939-201ENSMUST00000061201 2131 ntBASIC7.04□□□□□ -1.28
P20040 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Gm42656-201ENSMUST00000201506 2305 ntBASIC7.04□□□□□ -1.28
P20040 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
P20040 Trim39-205ENSMUST00000173369 2914 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
P20040 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms