Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 AC091783.1-201ENSMUST00000223614 1613 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 AC133598.5-201ENSMUST00000224937 1517 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Hdac7-203ENSMUST00000116408 4226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Osmr-204ENSMUST00000176826 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm4919-201ENSMUST00000117825 604 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm15047-201ENSMUST00000118891 454 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm15481-201ENSMUST00000120264 539 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm7420-201ENSMUST00000162836 842 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm26505-201ENSMUST00000176208 166 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm42767-201ENSMUST00000198583 632 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 G3bp2-201ENSMUST00000113127 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Adcy9-202ENSMUST00000117801 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 AC160340.1-201ENSMUST00000222952 3964 ntBASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm42811-201ENSMUST00000201951 2768 ntBASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm12635-201ENSMUST00000117285 752 ntBASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC8.04□□□□□ -1.12
Col4a6B1AVK5 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm7651-201ENSMUST00000173398 901 ntBASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm42963-201ENSMUST00000202943 1217 ntBASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 AC154532.1-201ENSMUST00000227860 965 ntBASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Srgap1-202ENSMUST00000081688 7787 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm10286-201ENSMUST00000093603 5077 ntBASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.04□□□□□ -1.12
Col4a6B1AVK5 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms