Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Il6st-209ENSMUST00000184445 1870 ntTSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 AC101875.1-201ENSMUST00000222666 2223 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm25762-201ENSMUST00000103984 132 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm26143-201ENSMUST00000104480 108 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm13059-201ENSMUST00000119881 398 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm2214-201ENSMUST00000121333 330 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm21990-201ENSMUST00000124692 383 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm8919-201ENSMUST00000182028 1014 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm37108-201ENSMUST00000194605 626 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Ighv10-2-201ENSMUST00000195182 298 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm43743-201ENSMUST00000197898 697 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm43247-201ENSMUST00000198638 481 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm6590-201ENSMUST00000203343 687 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm5418-201ENSMUST00000206932 528 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm3774-201ENSMUST00000209773 435 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm18030-201ENSMUST00000222163 731 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 AC123867.1-201ENSMUST00000224990 816 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm5590-201ENSMUST00000059110 345 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm10015-201ENSMUST00000072570 465 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 4933415A04Rik-201ENSMUST00000056256 2009 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm44007-201ENSMUST00000203845 2189 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm43292-201ENSMUST00000199580 2449 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm36938-201ENSMUST00000191612 2696 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm14186-201ENSMUST00000120804 137 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm25295-201ENSMUST00000122794 306 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm5350-201ENSMUST00000182057 1002 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm8407-201ENSMUST00000192719 427 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm9729-201ENSMUST00000196364 265 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm6394-201ENSMUST00000197077 477 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm43748-201ENSMUST00000202329 1233 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm43906-201ENSMUST00000203194 906 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm45475-201ENSMUST00000209381 309 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms